Class

io.projectglow.gff

GffResourceRelation

Related Doc: package gff

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class GffResourceRelation extends BaseRelation with PrunedScan

Linear Supertypes
PrunedScan, BaseRelation, AnyRef, Any
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Inherited
  1. GffResourceRelation
  2. PrunedScan
  3. BaseRelation
  4. AnyRef
  5. Any
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Visibility
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Instance Constructors

  1. new GffResourceRelation(sqlContext: SQLContext, path: String, requiredSchema: StructType)

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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  4. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any
  5. def buildScan(requiredColumns: Array[String]): RDD[Row]

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    buildScan for a BaseRelation that can eliminate unneeded columns before producing an RDD.

    buildScan for a BaseRelation that can eliminate unneeded columns before producing an RDD. It uses csv data source to read the gff file. In addition to base columns, it parses "attributes" column to populate the flattened attribute columns in the schema in correct data type. If schema contains "attributes" columns the original attributes column will be included as well.

    Definition Classes
    GffResourceRelation → PrunedScan
  6. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  7. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  8. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  9. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  10. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any
  11. def hashCode(): Int

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    Definition Classes
    AnyRef → Any
  12. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any
  13. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  14. def needConversion: Boolean

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    Definition Classes
    GffResourceRelation → BaseRelation
  15. final def notify(): Unit

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    Definition Classes
    AnyRef
  16. final def notifyAll(): Unit

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    Definition Classes
    AnyRef
  17. def schema: StructType

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    Definition Classes
    GffResourceRelation → BaseRelation
  18. def sizeInBytes: Long

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    Definition Classes
    BaseRelation
  19. val sqlContext: SQLContext

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    Definition Classes
    GffResourceRelation → BaseRelation
  20. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef
  21. def toString(): String

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    Definition Classes
    AnyRef → Any
  22. def unhandledFilters(filters: Array[Filter]): Array[Filter]

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    Definition Classes
    BaseRelation
  23. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  24. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  25. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from PrunedScan

Inherited from BaseRelation

Inherited from AnyRef

Inherited from Any

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