fragment

case class DatasetBoundFragmentRDD extends FragmentRDD with Product with Serializable
sealed abstract class FragmentRDD extends AvroRecordGroupGenomicRDD[Fragment, Fragment, FragmentRDD]
class InterleavedFASTQInFormatter extends InFormatter[Fragment, FragmentRDD, InterleavedFASTQInFormatter] with Logging
case class ParquetUnboundFragmentRDD extends FragmentRDD with Product with Serializable
case class RDDBoundFragmentRDD extends FragmentRDD with Product with Serializable
class Tab5InFormatter extends InFormatter[Fragment, FragmentRDD, Tab5InFormatter] with Logging
class Tab6InFormatter extends InFormatter[Fragment, FragmentRDD, Tab6InFormatter] with Logging

object FragmentRDD extends Serializable

Helper singleton object for building FragmentRDDs.
object InterleavedFASTQInFormatter extends InFormatterCompanion[Fragment, FragmentRDD, InterleavedFASTQInFormatter] with Serializable

InFormatter companion that creates an InFormatter that writes interleaved FASTQ.
object Tab5InFormatter extends InFormatterCompanion[Fragment, FragmentRDD, Tab5InFormatter] with Serializable

InFormatter companion that creates an InFormatter that writes Bowtie tab5 format.
object Tab6InFormatter extends InFormatterCompanion[Fragment, FragmentRDD, Tab6InFormatter] with Serializable

InFormatter companion that creates an InFormatter that writes Bowtie tab6 format.