#
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
–
deprecated
org
org.bdgenomics
org.bdgenomics.deca
org.bdgenomics.deca.cli
(class)
About
(object)
(class)
CNVer
(class)
CNVerArgs
(trait)
CoverageArgs
(object)
(class)
Coverager
(class)
CoveragerArgs
(object)
(class)
Discoverer
(class)
DiscovererArgs
(trait)
DiscoveryArgs
(trait)
NormalizeArgs
(object)
(class)
Normalizer
(class)
NormalizerArgs
(object)
(class)
NormalizingDiscoverer
(class)
NormalizingDiscovererArgs
org.bdgenomics.deca.cli.util
(class)
Handler
(class)
IntOptionHandler
(class)
StringOptionHandler