Object/Class

org.hammerlab.genomics.bases

Bases

Related Docs: class Bases | package bases

Permalink

object Bases

Linear Supertypes
AnyRef, Any
Ordering
  1. Alphabetic
  2. By Inheritance
Inherited
  1. Bases
  2. AnyRef
  3. Any
  1. Hide All
  2. Show All
Visibility
  1. Public
  2. All

Type Members

  1. type Bytes = Vector[Base]

    Permalink

Value Members

  1. final def !=(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

    Permalink
    Definition Classes
    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any

  4. implicit object BasesOrdering extends Ordering[Bases]

    Permalink

  5. def apply(basesStr: String): Bases

    Permalink

    Convert a string (e.g.

    Convert a string (e.g. "AAAGGC") to a byte array.

  6. def apply(bytes: Array[Base]): Bases

    Permalink

  7. def apply(bytes: Base*): Bases

    Permalink

  8. def apply(bytes: Bytes): Bases

    Permalink

  9. final def asInstanceOf[T0]: T0

    Permalink
    Definition Classes
    Any

  10. implicit val canBuildFromArrays: CanBuildFrom[Array[_], Base, Bases]

    Permalink

  11. implicit def canBuildFromBases: CanBuildFrom[Bases, Base, Bases]

    Permalink

  12. implicit val canBuildFromSeqs: CanBuildFrom[Iterable[_], Base, Bases]

    Permalink

  13. def clone(): AnyRef

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  14. val empty: Bases

    Permalink

  15. final def eq(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef

  16. def equals(arg0: Any): Boolean

    Permalink
    Definition Classes
    AnyRef → Any

  17. def finalize(): Unit

    Permalink
    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  18. final def getClass(): Class[_]

    Permalink
    Definition Classes
    AnyRef → Any

  19. def hashCode(): Int

    Permalink
    Definition Classes
    AnyRef → Any

  20. final def isInstanceOf[T0]: Boolean

    Permalink
    Definition Classes
    Any

  21. def iteratorOrdering[T](implicit ord: Ordering[T]): Ordering[Iterator[T]]

    Permalink

  22. final def ne(arg0: AnyRef): Boolean

    Permalink
    Definition Classes
    AnyRef

  23. def newBuilder: Builder[Base, Bases]

    Permalink

  24. final def notify(): Unit

    Permalink
    Definition Classes
    AnyRef

  25. final def notifyAll(): Unit

    Permalink
    Definition Classes
    AnyRef

  26. final def synchronized[T0](arg0: ⇒ T0): T0

    Permalink
    Definition Classes
    AnyRef

  27. def toString(): String

    Permalink
    Definition Classes
    AnyRef → Any

  28. final def wait(): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  29. final def wait(arg0: Long, arg1: Int): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  30. final def wait(arg0: Long): Unit

    Permalink
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from AnyRef

Inherited from Any

Ungrouped