Class

org.mitre.jcarafe.crf

DenseGeneralizedEMCrf

Related Doc: package crf

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abstract class DenseGeneralizedEMCrf extends DenseCrf with GeneralizedEMCrf

Linear Supertypes
GeneralizedEMCrf, DenseCrf, Crf, PotentialScoring, Trainable[AbstractInstance], Serializable, Serializable, AnyRef, Any
Known Subclasses
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Inherited
  1. DenseGeneralizedEMCrf
  2. GeneralizedEMCrf
  3. DenseCrf
  4. Crf
  5. PotentialScoring
  6. Trainable
  7. Serializable
  8. Serializable
  9. AnyRef
  10. Any
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Visibility
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Instance Constructors

  1. new DenseGeneralizedEMCrf(nls: Int, nfs: Int, segSize: Int, opts: Options)

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  2. new DenseGeneralizedEMCrf(lambdas: Array[Double], nls: Int, nfs: Int, segSize: Int, opts: Options)

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Type Members

  1. type Matrix = Array[Array[Double]]

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    Definition Classes
    PotentialScoring
  2. type Tensor = Array[Matrix]

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    Definition Classes
    PotentialScoring

Abstract Value Members

  1. abstract def train(seqAccessor: AccessSeq[AbstractInstance], maxIters: Int, mi: Option[(CoreModel, Int) ⇒ Unit]): CoreModel

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    Definition Classes
    CrfTrainable

Concrete Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  4. var adjustible: Boolean

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    When set to true, the Crf will allow the state-space to be dynamically sized - i.e.

    When set to true, the Crf will allow the state-space to be dynamically sized - i.e. the number of states is dependent on each sequence

    Definition Classes
    Crf
  5. var alpha: Matrix

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    Alpha values.

    Alpha values. Need values for each segment length for each label (in general, Semi-CRF case)

    Definition Classes
    Crf
  6. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any
  7. def assign(v1: Array[Double], f: (Double) ⇒ Double): Unit

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    Attributes
    protected
    Definition Classes
    Crf
  8. def assign1(v1: Array[Double], v2: Array[Double], f: (Double, Double) ⇒ Double): Unit

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    Attributes
    protected
    Definition Classes
    Crf
  9. def backwardPass(iseq: Seq[AbstractInstance]): Unit

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    Definition Classes
    GeneralizedEMCrfCrf
  10. def backwardPassConstrained(iseq: Seq[AbstractInstance]): Unit

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    Definition Classes
    GeneralizedEMCrf
  11. var beta: Matrix

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    Beta values.

    Beta values. Need values for each segment length for each label (in general, Semi-CRF case)

    Definition Classes
    Crf
  12. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  13. def computeScores(inst_features: Array[Array[Feature]], takeExp: Boolean): Unit

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    Attributes
    protected
    Definition Classes
    Crf
  14. final def computeScores(ri: Matrix, mi: Tensor, inst_features: Array[Array[Feature]], takeExp: Boolean, nls: Int, lambdas: Array[Double]): Unit

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    Definition Classes
    PotentialScoring
  15. def computeScoresConstrained(absInstSeq: Seq[AbstractInstance], pos: Int, takeExp: Boolean): Unit

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    Definition Classes
    GeneralizedEMCrf
  16. var conBeta: Matrix

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    Constrained Beta values.

    Constrained Beta values. Need values for each segment length for each label (in general, Semi-CRF case)

    Definition Classes
    GeneralizedEMCrf
  17. var conCurA: Array[Double]

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    Current constrained alpha values used for Forward-Backward computation

    Current constrained alpha values used for Forward-Backward computation

    Definition Classes
    GeneralizedEMCrf
  18. val conMarginalState: Array[Double]

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    Definition Classes
    GeneralizedEMCrf
  19. val conMarginals: Matrix

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    Definition Classes
    GeneralizedEMCrf
  20. var conMi: Tensor

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    For each segment size, the mi matrix holds transition scores for adjacent labels

    For each segment size, the mi matrix holds transition scores for adjacent labels

    Definition Classes
    GeneralizedEMCrf
  21. var conNewA: Array[Double]

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    Alpha values at the next position used for Forward-Backward computation

    Alpha values at the next position used for Forward-Backward computation

    Definition Classes
    GeneralizedEMCrf
  22. var conRi: Matrix

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    For each segment size (general case) the ri matrix holds state scores for each label

    For each segment size (general case) the ri matrix holds state scores for each label

    Definition Classes
    GeneralizedEMCrf
  23. var conScale: Array[Double]

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    Definition Classes
    GeneralizedEMCrf
  24. var conTmp: Array[Double]

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    Definition Classes
    GeneralizedEMCrf
  25. val curA: Array[Double]

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    Current alpha values used for Forward-Backward computation

    Current alpha values used for Forward-Backward computation

    Definition Classes
    Crf
  26. var curNls: Int

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    Definition Classes
    Crf
  27. val empiricalDist: Boolean

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  28. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  29. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  30. val featureExpectations: Array[Double]

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    Definition Classes
    DenseCrf
  31. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  32. def forwardPass(iseq: IndexedSeq[AbstractInstance]): Double

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    Definition Classes
    DenseGeneralizedEMCrfDenseCrfCrf
  33. val gPrior: Double

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    The Gaussian prior variance used as a regularizer

    The Gaussian prior variance used as a regularizer

    Definition Classes
    Crf
  34. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any
  35. def getCoreModel(): CoreModel

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    Definition Classes
    CrfTrainable
  36. def getGradient(l2: Boolean, seqAccessor: AccessSeq[AbstractInstance]): Option[Double]

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    Definition Classes
    DenseCrf
  37. def getGradient(seqAccessor: AccessSeq[AbstractInstance]): Option[Double]

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    Definition Classes
    DenseCrfCrfTrainable
  38. def getLambdas: Array[Double]

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    Definition Classes
    Trainable
  39. def gradOfSeq(iseq: IndexedSeq[AbstractInstance]): Double

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    Definition Classes
    DenseGeneralizedEMCrfDenseCrf
  40. val gradient: Array[Double]

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    Definition Classes
    DenseCrf
  41. def hashCode(): Int

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    Definition Classes
    AnyRef → Any
  42. def initialize(): Unit

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    Definition Classes
    CrfTrainable
  43. val invSigSqr: Double

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    The value of the inverse square of the Gaussian prior

    The value of the inverse square of the Gaussian prior

    Definition Classes
    Crf
  44. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any
  45. val lambdas: Array[Double]

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    Parameter (lambda) vector

    Parameter (lambda) vector

    Definition Classes
    CrfTrainable
  46. final def matrixMult(mat: Matrix, vec: Array[Double], rvec: Array[Double], alpha: Double, beta: Double, trans: Boolean): Unit

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    Definition Classes
    PotentialScoring
  47. val mi: Tensor

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    For each segment size, the mi matrix holds transition scores for adjacent labels

    For each segment size, the mi matrix holds transition scores for adjacent labels

    Definition Classes
    Crf
  48. val nGates: Int

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    Number of neural gates per label (for NeuralCrf)

    Number of neural gates per label (for NeuralCrf)

    Definition Classes
    Crf
  49. val nNfs: Int

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    Number of neural gate input features (for NeuralCrf)

    Number of neural gate input features (for NeuralCrf)

    Definition Classes
    Crf
  50. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  51. val newA: Array[Double]

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    Alpha values at the next position used for Forward-Backward computation

    Alpha values at the next position used for Forward-Backward computation

    Definition Classes
    Crf
  52. val nfs: Int

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    Number of features

    Number of features

    Definition Classes
    Crf
  53. val nls: Int

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    Number of labels/states

    Number of labels/states

    Definition Classes
    Crf
  54. final def notify(): Unit

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    Definition Classes
    AnyRef
  55. final def notifyAll(): Unit

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    Definition Classes
    AnyRef
  56. val numParams: Int

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    Definition Classes
    CrfTrainable
  57. def printMi(m: Array[Array[Array[Double]]]): Unit

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    Definition Classes
    GeneralizedEMCrf
  58. def regularize(): Double

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    Definition Classes
    DenseCrf
  59. def reset(all: Boolean, slen: Int): Unit

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    Attributes
    protected
    Definition Classes
    GeneralizedEMCrfCrf
  60. def resetParameters(): Unit

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    Definition Classes
    Crf
  61. val ri: Matrix

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    For each segment size (general case) the ri matrix holds state scores for each label

    For each segment size (general case) the ri matrix holds state scores for each label

    Definition Classes
    Crf
  62. var scale: Array[Double]

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    An array of scaling coefficients to avoid underflow without having to do computations in log space.

    An array of scaling coefficients to avoid underflow without having to do computations in log space. See Manning and Schutze Chapter 9 for details (there in the context of HMMs)

    Definition Classes
    Crf
  63. val segSize: Int

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    The size of segments.

    The size of segments. Sizes greater than 1 indicate the model is a semi-CRF

    Definition Classes
    Crf
  64. def setConstrainedMarginals(ri: Array[Double], mi: Matrix, pos: Int): Unit

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    Definition Classes
    GeneralizedEMCrf
  65. final def setMatrix(m: Matrix, v: Double = 0.0): Unit

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    Definition Classes
    PotentialScoring
  66. final def setTensor(t: Tensor, v: Double = 0.0): Unit

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    Definition Classes
    PotentialScoring
  67. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef
  68. val tmp: Array[Double]

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    Definition Classes
    Crf
  69. def toString(): String

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    Definition Classes
    AnyRef → Any
  70. def train(seqAccessor: AccessSeq[AbstractInstance]): CoreModel

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    Definition Classes
    Crf
  71. def updateScoreMatrices(iseq: Seq[AbstractInstance], pos: Int): Unit

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    Attributes
    protected
    Definition Classes
    GeneralizedEMCrf
  72. def vecSum(vec: Array[Double]): Double

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    Attributes
    protected
    Definition Classes
    Crf
  73. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  74. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  75. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from GeneralizedEMCrf

Inherited from DenseCrf

Inherited from Crf

Inherited from PotentialScoring

Inherited from Trainable[AbstractInstance]

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

Ungrouped