htsjdk.samtools
Enum SQTagUtil.SQBase
java.lang.Object
java.lang.Enum<SQTagUtil.SQBase>
htsjdk.samtools.SQTagUtil.SQBase
- All Implemented Interfaces:
- java.io.Serializable, java.lang.Comparable<SQTagUtil.SQBase>
- Enclosing class:
- SQTagUtil
public static enum SQTagUtil.SQBase
- extends java.lang.Enum<SQTagUtil.SQBase>
The ordinals of these are stored in the high-order 2 bits of each byte of the SQ tag.
Note that these have the convenient property that the binary complement of each ordinal, masked to
the two low-order bits, is the complementary base.
Method Summary |
java.lang.Character |
getBase()
|
static SQTagUtil.SQBase |
valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name. |
static SQTagUtil.SQBase[] |
values()
Returns an array containing the constants of this enum type, in
the order they are declared. |
Methods inherited from class java.lang.Enum |
clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf |
Methods inherited from class java.lang.Object |
getClass, notify, notifyAll, wait, wait, wait |
SQ_A
public static final SQTagUtil.SQBase SQ_A
SQ_C
public static final SQTagUtil.SQBase SQ_C
SQ_G
public static final SQTagUtil.SQBase SQ_G
SQ_T
public static final SQTagUtil.SQBase SQ_T
values
public static SQTagUtil.SQBase[] values()
- Returns an array containing the constants of this enum type, in
the order they are declared. This method may be used to iterate
over the constants as follows:
for (SQTagUtil.SQBase c : SQTagUtil.SQBase.values())
System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in
the order they are declared
valueOf
public static SQTagUtil.SQBase valueOf(java.lang.String name)
- Returns the enum constant of this type with the specified name.
The string must match exactly an identifier used to declare an
enum constant in this type. (Extraneous whitespace characters are
not permitted.)
- Parameters:
name
- the name of the enum constant to be returned.
- Returns:
- the enum constant with the specified name
- Throws:
java.lang.IllegalArgumentException
- if this enum type has no constant
with the specified name
java.lang.NullPointerException
- if the argument is null
getBase
public java.lang.Character getBase()