LikelihoodRatioTest

Value Members

1. final def !=(arg0: Any): Boolean

   

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2. final def ##(): Int

   

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3. final def ==(arg0: Any): Boolean

   

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4. final def asInstanceOf[T0]: T0

   

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5. def clone(): AnyRef

   

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6. final def eq(arg0: AnyRef): Boolean

   

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7. def equals(arg0: Any): Boolean

   

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8. def finalize(): Unit

   

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9. def fitStatePerPhenotype: Boolean

   

   If true, the FitState uses per-phenotype information and must be refit for each phenotype.

   If true, the FitState uses per-phenotype information and must be refit for each phenotype. If false, the FitState only depends on the covariates

   Definition Classes

   LikelihoodRatioTest → LogitTest

10. final def getClass(): Class[_]

    

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11. def hashCode(): Int

    

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12. def init(phenotypes: Array[Double], covariates: DenseMatrix): LRTFitState

    

    Initializes a FitState for a (covariate matrix, phenotype array) pair.

    Initializes a FitState for a (covariate matrix, phenotype array) pair.

    As much memory allocation as possible should be performed in this step to avoid allocations in the per-row fit.

    Definition Classes

    LikelihoodRatioTest → LogitTest

13. final def isInstanceOf[T0]: Boolean

    

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14. final def ne(arg0: AnyRef): Boolean

    

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15. final def notify(): Unit

    

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16. final def notifyAll(): Unit

    

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17. val resultSchema: StructType

    

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    LikelihoodRatioTest → LogitTest

18. def runTest(genotypes: DenseVector[Double], phenotypes: DenseVector[Double], fitState: LRTFitState): InternalRow

    

    Definition Classes

    LikelihoodRatioTest → LogitTest

19. final def synchronized[T0](arg0: ⇒ T0): T0

    

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20. def toString(): String

    

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21. final def wait(): Unit

    

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22. final def wait(arg0: Long, arg1: Int): Unit

    

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23. final def wait(arg0: Long): Unit

    

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