Object/Class

org.bdgenomics.adam.rdd.feature

FeatureDataset

Related Docs: class FeatureDataset | package feature

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object FeatureDataset

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  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  4. def apply(rdd: RDD[Feature], sd: SequenceDictionary, samples: Iterable[Sample]): FeatureDataset

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    Builds a FeatureDataset that wraps an RDD of Feature data given a sequence dictionary.

    Builds a FeatureDataset that wraps an RDD of Feature data given a sequence dictionary.

    rdd

    The underlying Feature RDD to build from.

    sd

    The sequence dictionary for this FeatureDataset.

    samples

    The samples in this FeatureDataset.

    returns

    Returns a new FeatureDataset.

  5. def apply(rdd: RDD[Feature]): FeatureDataset

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    Builds a FeatureDataset that wraps an RDD of Feature data with an empty sequence dictionary.

    Builds a FeatureDataset that wraps an RDD of Feature data with an empty sequence dictionary.

    rdd

    The underlying Feature RDD to build from.

    returns

    Returns a new FeatureDataset.

  6. def apply(ds: Dataset[Feature], sequences: SequenceDictionary, samples: Iterable[Sample]): FeatureDataset

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    A GenomicDataset that wraps a Dataset of Feature data given a sequence dictionary.

    A GenomicDataset that wraps a Dataset of Feature data given a sequence dictionary.

    ds

    A Dataset of genomic Features.

  7. def apply(ds: Dataset[Feature]): FeatureDataset

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    A GenomicDataset that wraps a Dataset of Feature data with an empty sequence dictionary.

    A GenomicDataset that wraps a Dataset of Feature data with an empty sequence dictionary.

    ds

    A Dataset of genomic Features.

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