traitInFormatterCompanion[T, U <: GenomicRDD[T, U], V <: InFormatter[T, U, V]] extends AnyRef
A trait for singleton objects that build an InFormatter from a GenomicRDD.
Often, when creating an outputstream, we need to add metadata to the output
that is not attached to individual records. An example of this is writing a
header with contig/read group/format info, as is done with SAM/BAM/VCF.
T
The type of the records this InFormatter writes out.
U
The type of the GenomicRDD this companion object understands.
V
The type of InFormatter this companion object creates.
A trait for singleton objects that build an InFormatter from a GenomicRDD.
Often, when creating an outputstream, we need to add metadata to the output that is not attached to individual records. An example of this is writing a header with contig/read group/format info, as is done with SAM/BAM/VCF.
The type of the records this InFormatter writes out.
The type of the GenomicRDD this companion object understands.
The type of InFormatter this companion object creates.