Sample
utils
Sampler
work
Sampling
utils
ScalaUtils
common
SerialUtils
utils
SharedAltAlleleCount
metrics
SimpleMeiosisSpecFactory
impl
SparkApp
spark
SparkArgs
args
SparkTask
spark
SparkUtils
spark spark
SparkleJavaApp
spark
SplitInfo
algo
SplitNode
algo
SqlContextHolder
api
StandardImportanceNormalizer
algo
StreamTest
work
SubsetInfo
algo
Summary
FamilySpec
SymbolTable
expr
sampleIds
FamilyVariantBuilder
sampleNames
HailFeatureSource CsvFeatureSource FeatureSource ParquetFeatureSource VCFFeatureSource OrdinalFeatureGenerator
save
CSVFeatureSink CSVFeatureSink2 FeatureSink ParquetFeatureSink
saveParallel
GeneratePopulationCmd
sc
SparkApp VSContext
scale
StandardImportanceNormalizer
schema
RfImportanceAnalysis
seed
DecisionTreeParams RandomForestParams RandomizingMerger SimpleMeiosisSpecFactory OrdinalFeatureGenerator
separator
DefVariantToFeatureConverter
seqOp
PairWiseAggregator
set
Counter
simpleAssert
utils
size
CanSplitArrayByte CanSplitVector DecisionTreeNode LeafNode RandomForestModel SplitNode CanSize IndexedRDDFunction IndexedVectorRDDFunction
sizeFromUpperDiagLenght
PairwiseOperation
snpMutation
DatasetMutationFactory
someIf
utils
space
utils
spark
ssparkle SparkApp sparkle VSContext
sparkPar
CochranArmanCmd GenerateFeaturesCmd GenerateLabelsCmd GenerateLabelsNoiseCmd ImportanceCmd SparkArgs OrdinalFeatureGenerator
sparkle
csiro
specFile
GeneratePopulationCmd
split
CanSplit CanSplitArrayByte CanSplitVector VarSplitInfo Projector
splitGiniInpurity
Gini
splitPoint
SplitInfo SplitNode VarSplitInfo
splitRDD
Projector
splitSubsets
DecisionTree VariableSplitter
splitVariableIndex
SplitNode
splitVariableIndexes
DecisionTreeModel
splitWarning
utils
splits
GameteSpec
splitsToStream
DecisionTreeNode
sqlContext
SparkApp ImportanceAnalysis SqlContextHolder VSContext HailContextAdapter
sqr
Gini
square
WideKMeans utils
squareForm
PairwiseOperation
ssparkle
pbdava
startTime
Timer
startWith
MeiosisSpec
stats
variantspark breeze
stdout
ReusablePrintStream
strVCF
ExportVCFEx
subsample
RandomForestParams Projector Sampling
subsampleFraction
Sampling
subset
FactorVariable
summary
FamilySpec