NEXT_IDX_QUERY
BgenFileFormat
NORMALIZER_TRANSFORMER_NAME
NormalizeVariantsTransformer
NUM_MAGIC_BYTES
PlinkFileFormat
Named
common
NewtonIterationsState
expressions
NewtonResult
expressions
NormalizeVariantExpr
expressions
NormalizeVariantsTransformer
normalizevariants
n
LeveneHaldane
nA
LeveneHaldane
nAllelesCalled
CallStatsStruct
nB
LeveneHaldane
nCalled
CallStatsStruct SampleCallStats
nDeletion
SampleCallStats
nHet
CallStatsStruct SampleCallStats
nHomRef
SampleCallStats
nHomVar
SampleCallStats
nHomozygous
CallStatsStruct
nInsertion
SampleCallStats
nIter
NewtonResult
nNonRef
CallStatsStruct
nSpanningDeletion
SampleCallStats
nTransition
SampleCallStats
nTransversion
SampleCallStats
nUncalled
CallStatsStruct SampleCallStats
name
Named MetricDefinition TagDefinition LiftOverVariantsTransformer BlockVariantsAndSamplesTransformer NormalizeVariantsTransformer CSVInputFormatterFactory CSVOutputFormatterFactory CleanupPipeTransformer PipeTransformer UTF8TextInputFormatterFactory UTF8TextOutputFormatterFactory SplitMultiallelicsTransformer VCFInputFormatterFactory VCFOutputFormatterFactory
nameField
FeatureSchemas
names
VCFRow
namesField
VariantSchemas
nanRow
LogitTestResults
needConversion
GffResourceRelation
newAnalysisException
SQLUtils
newFields
AddStructFields
newMatrixUDT
SQLUtils
newVectorUDT
SQLUtils
newtonState
LRTFitState
next
BedFileIterator HadoopLineIterator PipeIterator LineIteratorImpl
normalizationResultFieldName
VariantNormalizer
normalizationResultStructType
VariantNormalizer
normalizationStatusFieldName
VariantNormalizer
normalizationStatusStructField
VariantNormalizer
normalizeAttributesMapKeys
GffDataSource
normalizeString
GffDataSource
normalizeVariant
VariantNormalizer
normalizeVariants
NormalizeVariantsTransformer
normalize_variant
functions
normalizevariants
transformers
noteField
FeatureSchemas
nullFit
LRTFitState
nullFitArgs
FirthFitState
nullFitMap
LogisticRegressionState
nullSafeCodeGen
QuaternaryExpression SenaryExpression
nullSafeEval
QuaternaryExpression ArrayStatsSummary ArrayToDenseVector ArrayToSparseVector CallStats GenotypeStates HardyWeinberg LinearRegressionExpr LogisticRegressionExpr NormalizeVariantExpr VectorToArray SenaryExpression
nullable
QuaternaryExpression AggregateByIndex CallSummaryStats ExpandStruct HardCalls LiftOverCoordinatesExpr PerSampleSummaryStatistics Rewrite RewriteAfterResolution SenaryExpression
numAlleles
GenotypeCharacteristics
numAlts
HardCalls
numBlocks
ProbabilityBlockSize