REFERENCE_GENOME_PATH
NormalizeVariantsTransformer
REPLACE_COLUMNS
NormalizeVariantsTransformer
RegressionStats
expressions
ReplaceExpressionsRule
optimizer
ResolveAggregateFunctionsRule
optimizer
ResolveExpandStructRule
optimizer
ResolveGenotypeFields
optimizer
Rewrite
util
RewriteAfterResolution
util
RowConverter
util
readHeaderLines
VCFHeaderUtils
readVcfHeader
VCFMetadataLoader
recordHlsEvent
HlsEventRecorder
PythonHlsEventRecorder
recordHlsUsage
HlsUsageLogging
refAllele
CallSummaryStats
NormalizeVariantExpr
refAlleleField
VariantSchemas
refGenomePathString
NormalizeVariantExpr
referenceAllele
VCFRow
register
GlowBase
registerFunctions
SqlExtensionProvider
replaceMissingSampleIds
VCFStreamWriter
replaceSampleIds
VCFStreamWriter
requireWritableAsVCF
VCFFileFormat
requiredFieldIndices
GenotypeInfo
requiredGenotypeFields
CallStats
CallSummaryStats
GenotypeStates
HardyWeinberg
PerSampleSummaryStatistics
ExpectsGenotypeFields
requiredSchema
CallStats
resetState
DatabricksBGZFOutputStream
resolutionRules
GlowSQLExtensions
resolveGenotypeInfo
ExpectsGenotypeFields
resolved
ExpandStruct
ExpectsGenotypeFields
resultSchema
FirthTest
LikelihoodRatioTest
LogitTest
reverseAliases
GenotypeFields
rewrite
AddStructFields
DpSummaryStats
GqSummaryStats
MeanSubstitute
SampleDpSummaryStatistics
SampleGqSummaryStatistics
SubsetStruct
Rewrite
RewriteAfterResolution
rightMidP
LeveneHaldane
runRegression
LinearRegressionGwas
runTest
FirthTest
LikelihoodRatioTest
LogitTest