pairwisealignment/pairwisealignment/GlobalPairwiseAlignment

GlobalPairwiseAlignment

object GlobalPairwiseAlignment
class Object
trait Matchable
class Any

Value members

Concrete methods

def editDistance(v: String, w: String): Int
def globalAffineAlignment(v: String, w: String, score: Map[(Char, Char), Int], gapopen: Int, gapextension: Int): (Int, String, String)
def globalAlignment(v: String, w: String, score: Map[(Char, Char), Int], indelpenalty: Int, gapextension: Int): (Int, String, String)