pairwisealignment
pairwisealignment
pairwisealignment
FittingPairwiseAlignment
GlobalPairwiseAlignment
LocalPairwiseAlignment
LongestCommonSubstring
OverlapPairwiseAlignment
pairwisealignment.wfa
Deletion
Insertion
MatchOrMismatch
Op
WFA
pairwisealignment
/
pairwisealignment
/
LocalPairwiseAlignment
LocalPairwiseAlignment
object
LocalPairwiseAlignment
Graph
Supertypes
class
Object
trait
Matchable
class
Any
Value members
Value members
Concrete methods
def
localAlignment
(v:
String
, w:
String
, score:
Map
[(
Char
,
Char
),
Int
], indelpenalty:
Int
): (
Int
,
String
,
String
)